1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_18871g0020

MA_18871g0020


Description : Trihelix transcription factor ASR3 OS=Arabidopsis thaliana (sp|q8vz20|asr3_arath : 80.1)


Gene families : OG0000269 (Archaeplastida) Phylogenetic Tree(s): OG0000269_tree ,
OG_05_0001194 (LandPlants) Phylogenetic Tree(s): OG_05_0001194_tree ,
OG_06_0013689 (SeedPlants) Phylogenetic Tree(s): OG_06_0013689_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18871g0020
Cluster HCCA: Cluster_492

Target Alias Description ECC score Gene Family Method Actions
Gb_05266 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.04 Archaeplastida
Gb_12440 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.02 Archaeplastida
Mp1g23310.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!