AT5G40390 (SIP1)

Aliases : SIP1

Description : Raffinose synthase family protein

Gene families : OG0000586 (Archaeplastida) Phylogenetic Tree(s): OG0000586_tree ,
OG_05_0004410 (LandPlants) Phylogenetic Tree(s): OG_05_0004410_tree ,
OG_06_0006374 (SeedPlants) Phylogenetic Tree(s): OG_06_0006374_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40390
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00147100	evm_27.TU.AmTr_v1...	Galactinol--sucrose galactosyltransferase OS=Oryza...	0.03	Archaeplastida
AMTR_s00021p00147600	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.raffinose family oligosaccharide...	0.03	Archaeplastida
AMTR_s00103p00156250	evm_27.TU.AmTr_v1...	Probable galactinol--sucrose galactosyltransferase 2...	0.02	Archaeplastida
Cre16.g666334	No alias	Probable galactinol--sucrose galactosyltransferase 2...	0.02	Archaeplastida
GSVIVT01014778001	No alias	Probable galactinol--sucrose galactosyltransferase 1...	0.03	Archaeplastida
GSVIVT01015589001	No alias	Probable galactinol--sucrose galactosyltransferase 6...	0.03	Archaeplastida
GSVIVT01032425001	No alias	Protein degradation.peptidase families.aspartic-type...	0.03	Archaeplastida
LOC_Os01g07530.1	No alias	raffinose synthase	0.04	Archaeplastida
LOC_Os07g10840.1	No alias	raffinose alpha-galactosidase	0.03	Archaeplastida
MA_131024g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp3g19770.1	No alias	Probable galactinol--sucrose galactosyltransferase 2...	0.03	Archaeplastida
Zm00001e033100_P002	No alias	raffinose alpha-galactosidase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0005985	sucrose metabolic process	None	Extended
BP	GO:0005986	sucrose biosynthetic process	IMP	Interproscan
BP	GO:0006059	hexitol metabolic process	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008378	galactosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009312	oligosaccharide biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IEP	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IMP	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019400	alditol metabolic process	None	Extended
BP	GO:0019401	alditol biosynthetic process	None	Extended
BP	GO:0019406	hexitol biosynthetic process	None	Extended
BP	GO:0019593	mannitol biosynthetic process	IMP	Interproscan
BP	GO:0019594	mannitol metabolic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046173	polyol biosynthetic process	None	Extended
BP	GO:0046351	disaccharide biosynthetic process	None	Extended
MF	GO:0047274	galactinol-sucrose galactosyltransferase activity	ISS	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004310	farnesyl-diphosphate farnesyltransferase activity	IEP	Neighborhood
MF	GO:0004311	farnesyltranstransferase activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004805	trehalose-phosphatase activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005388	calcium-transporting ATPase activity	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006882	cellular zinc ion homeostasis	IEP	Neighborhood
BP	GO:0006970	response to osmotic stress	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0007602	phototransduction	IEP	Neighborhood
BP	GO:0007623	circadian rhythm	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0008909	isochorismate synthase activity	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
BP	GO:0009269	response to desiccation	IEP	Neighborhood
BP	GO:0009408	response to heat	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009585	red, far-red light phototransduction	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009620	response to fungus	IEP	Neighborhood
BP	GO:0009631	cold acclimation	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009757	hexose mediated signaling	IEP	Neighborhood
BP	GO:0009861	jasmonic acid and ethylene-dependent systemic resistance	IEP	Neighborhood
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0010046	response to mycotoxin	IEP	Neighborhood
BP	GO:0010109	regulation of photosynthesis	IEP	Neighborhood
BP	GO:0010119	regulation of stomatal movement	IEP	Neighborhood
BP	GO:0010205	photoinhibition	IEP	Neighborhood
BP	GO:0010255	glucose mediated signaling pathway	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
MF	GO:0010436	carotenoid dioxygenase activity	IEP	Neighborhood
BP	GO:0010466	negative regulation of peptidase activity	IEP	Neighborhood
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
BP	GO:0016144	S-glycoside biosynthetic process	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
BP	GO:0019758	glycosinolate biosynthetic process	IEP	Neighborhood
BP	GO:0019761	glucosinolate biosynthetic process	IEP	Neighborhood
BP	GO:0030162	regulation of proteolysis	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
BP	GO:0032269	negative regulation of cellular protein metabolic process	IEP	Neighborhood
MF	GO:0035250	UDP-galactosyltransferase activity	IEP	Neighborhood
BP	GO:0042372	phylloquinone biosynthetic process	IEP	Neighborhood
BP	GO:0042374	phylloquinone metabolic process	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Neighborhood
BP	GO:0043086	negative regulation of catalytic activity	IEP	Neighborhood
BP	GO:0043155	negative regulation of photosynthesis, light reaction	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
BP	GO:0044092	negative regulation of molecular function	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	Neighborhood
BP	GO:0045861	negative regulation of proteolysis	IEP	Neighborhood
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
MF	GO:0047216	inositol 3-alpha-galactosyltransferase activity	IEP	Neighborhood
BP	GO:0048511	rhythmic process	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
MF	GO:0050486	intramolecular transferase activity, transferring hydroxy groups	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0050832	defense response to fungus	IEP	Neighborhood
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051336	regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0052547	regulation of peptidase activity	IEP	Neighborhood
BP	GO:0052548	regulation of endopeptidase activity	IEP	Neighborhood
BP	GO:0055069	zinc ion homeostasis	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	Neighborhood
BP	GO:0071365	cellular response to auxin stimulus	IEP	Neighborhood
MF	GO:0080103	4-methylthiopropyl glucosinolate S-oxygenase activity	IEP	Neighborhood
MF	GO:0080107	8-methylthiopropyl glucosinolate S-oxygenase activity	IEP	Neighborhood
MF	GO:0080123	jasmonate-amino synthetase activity	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Neighborhood
BP	GO:1902456	regulation of stomatal opening	IEP	Neighborhood
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905156	negative regulation of photosynthesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR008811	Glycosyl_hydrolases_36	22	767

External Links

No external refs found!

AT5G40390 (SIP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation