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  5. MA_19520g0020

MA_19520g0020


Description : transcription factor (HD-ZIP III)


Gene families : OG0000862 (Archaeplastida) Phylogenetic Tree(s): OG0000862_tree ,
OG_05_0000983 (LandPlants) Phylogenetic Tree(s): OG_05_0000983_tree ,
OG_06_0000998 (SeedPlants) Phylogenetic Tree(s): OG_06_0000998_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_19520g0020
Cluster HCCA: Cluster_506

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00069240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.02 Archaeplastida
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.03 Archaeplastida
GSVIVT01017010001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01025193001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01035612001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_02083 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Gb_10259 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Gb_18245 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Gb_22761 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
LOC_Os03g43930.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Pp3c16_15450V3.1 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.04 Archaeplastida
Solyc08g066500.4.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Solyc11g069470.3.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e000073_P001 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Zm00001e012408_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013978 MEKHLA 679 821
IPR002913 START_lipid-bd_dom 144 352
IPR001356 Homeobox_dom 18 76
No external refs found!