AT5G40940 (FLA20)


Aliases : FLA20

Description : putative fasciclin-like arabinogalactan protein 20


Gene families : OG0003434 (Archaeplastida) Phylogenetic Tree(s): OG0003434_tree ,
OG_05_0002387 (LandPlants) Phylogenetic Tree(s): OG_05_0002387_tree ,
OG_06_0012167 (SeedPlants) Phylogenetic Tree(s): OG_06_0012167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G40940
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT5G06920 FLA21 FASCICLIN-like arabinogalactan protein 21 precursor 0.02 Archaeplastida
Pp3c13_8280V3.1 No alias Fasciclin-like arabinogalactan family protein 0.02 Archaeplastida
Pp3c26_11940V3.1 No alias Fasciclin-like arabinogalactan family protein 0.02 Archaeplastida
Pp3c3_3640V3.1 No alias Fasciclin-like arabinogalactan family protein 0.02 Archaeplastida
Solyc11g072680.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010528 regulation of transposition IEP Neighborhood
BP GO:0010529 negative regulation of transposition IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019499 cyanide metabolic process IEP Neighborhood
BP GO:0031056 regulation of histone modification IEP Neighborhood
BP GO:0031057 negative regulation of histone modification IEP Neighborhood
BP GO:0031058 positive regulation of histone modification IEP Neighborhood
BP GO:0031060 regulation of histone methylation IEP Neighborhood
BP GO:0031062 positive regulation of histone methylation IEP Neighborhood
BP GO:0031401 positive regulation of protein modification process IEP Neighborhood
MF GO:0031490 chromatin DNA binding IEP Neighborhood
BP GO:0035065 regulation of histone acetylation IEP Neighborhood
BP GO:0035067 negative regulation of histone acetylation IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0046202 cyanide biosynthetic process IEP Neighborhood
BP GO:0048654 anther morphogenesis IEP Neighborhood
BP GO:0048658 anther wall tapetum development IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051570 regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0055046 microgametogenesis IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Neighborhood
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Neighborhood
BP GO:1901983 regulation of protein acetylation IEP Neighborhood
BP GO:1901984 negative regulation of protein acetylation IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905268 negative regulation of chromatin organization IEP Neighborhood
BP GO:1905269 positive regulation of chromatin organization IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!