1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G40960

AT5G40960


Description : Protein of unknown function (DUF 3339)


Gene families : OG0000939 (Archaeplastida) Phylogenetic Tree(s): OG0000939_tree ,
OG_05_0000589 (LandPlants) Phylogenetic Tree(s): OG_05_0000589_tree ,
OG_06_0020033 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G40960
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008561001 No alias No description available 0.03 Archaeplastida
LOC_Os05g01290.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Neighborhood
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR021775 DUF3339 1 67
No external refs found!