MA_196188g0010


Description : Vacuolar protein sorting-associated protein 52 A OS=Arabidopsis thaliana (sp|q94kd3|vp52a_arath : 130.0)


Gene families : OG0004685 (Archaeplastida) Phylogenetic Tree(s): OG0004685_tree ,
OG_05_0005453 (LandPlants) Phylogenetic Tree(s): OG_05_0005453_tree ,
OG_06_0005454 (SeedPlants) Phylogenetic Tree(s): OG_06_0005454_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_196188g0010
Cluster HCCA: Cluster_479

Target Alias Description ECC score Gene Family Method Actions
AT1G71270 POK, TTD8, ATVPS52 Vps52 / Sac2 family 0.03 Archaeplastida
LOC_Os03g30460.1 No alias component VPS52/POK of GARP/EARP... 0.04 Archaeplastida
Pp3c4_27380V3.1 No alias Vps52 / Sac2 family 0.04 Archaeplastida
Smo235014 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 Archaeplastida
Zm00001e038047_P004 No alias component VPS52/POK of GARP/EARP... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007258 Vps52 1 88
No external refs found!