MA_197719g0010


Description : histone (H3)


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree ,
OG_06_0000125 (SeedPlants) Phylogenetic Tree(s): OG_06_0000125_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_197719g0010
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AMTR_s00225p00023630 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AT1G09200 No alias Histone superfamily protein 0.06 Archaeplastida
AT1G19890 ATMGH3, MGH3 male-gamete-specific histone H3 0.02 Archaeplastida
AT3G27360 No alias Histone superfamily protein 0.08 Archaeplastida
AT5G10390 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G10400 No alias Histone superfamily protein 0.07 Archaeplastida
AT5G65360 No alias Histone superfamily protein 0.06 Archaeplastida
Cre02.g104800 No alias Histone H3 OS=Volvox carteri 0.01 Archaeplastida
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.1 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.09 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.07 Archaeplastida
GSVIVT01009838001 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.04 Archaeplastida
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.06 Archaeplastida
GSVIVT01027073001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 Archaeplastida
GSVIVT01032047001 No alias Histone H3 OS=Volvox carteri 0.04 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.05 Archaeplastida
Gb_08475 No alias histone (H3) 0.03 Archaeplastida
Gb_15586 No alias histone (H3) 0.06 Archaeplastida
Gb_19430 No alias histone (H3) 0.03 Archaeplastida
Gb_27618 No alias histone (H3) 0.11 Archaeplastida
Gb_29026 No alias histone (H3) 0.06 Archaeplastida
Gb_29027 No alias histone (H3) 0.07 Archaeplastida
Gb_30564 No alias histone (H3) 0.07 Archaeplastida
Gb_36661 No alias histone (H3) 0.06 Archaeplastida
Gb_40804 No alias histone (H3) 0.08 Archaeplastida
LOC_Os01g64640.1 No alias histone (H3) 0.09 Archaeplastida
LOC_Os02g25910.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os03g27310.2 No alias histone (H3) 0.03 Archaeplastida
LOC_Os04g34240.1 No alias histone (H3) 0.07 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.08 Archaeplastida
LOC_Os05g41080.1 No alias histone H3 variant (CENH3) 0.04 Archaeplastida
LOC_Os06g04030.1 No alias histone (H3) 0.05 Archaeplastida
LOC_Os06g06460.1 No alias histone (H3) 0.05 Archaeplastida
LOC_Os06g06480.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os06g06510.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os11g05730.1 No alias histone (H3) 0.09 Archaeplastida
MA_10432805g0020 No alias histone (H3) 0.05 Archaeplastida
MA_113838g0010 No alias histone (H3) 0.09 Archaeplastida
MA_125055g0020 No alias Histone H3.2 OS=Cichorium intybus (sp|q5mya4|h32_cicin : 122.0) 0.07 Archaeplastida
MA_210354g0010 No alias histone (H3) 0.03 Archaeplastida
MA_222556g0010 No alias Histone H3.2 OS=Lilium longiflorum (sp|q402e1|h32_lillo : 116.0) 0.03 Archaeplastida
MA_24261g0010 No alias histone (H3) 0.04 Archaeplastida
MA_475294g0010 No alias histone (H3) 0.03 Archaeplastida
MA_561217g0010 No alias histone (H3) 0.08 Archaeplastida
MA_56411g0010 No alias histone (H3) 0.03 Archaeplastida
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.05 Archaeplastida
MA_871602g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g09090.1 No alias histone (H3) 0.07 Archaeplastida
Mp3g11410.1 No alias histone (H3) 0.02 Archaeplastida
Mp7g10730.1 No alias histone (H3) 0.03 Archaeplastida
Mp7g18030.1 No alias histone (H3) 0.03 Archaeplastida
Pp3c18_14481V3.1 No alias Histone superfamily protein 0.04 Archaeplastida
Pp3c1_20670V3.1 No alias Histone superfamily protein 0.04 Archaeplastida
Pp3c20_8550V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c22_8680V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.06 Archaeplastida
Pp3c24_11100V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Smo171192 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 Archaeplastida
Smo269004 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.07 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.07 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.05 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.06 Archaeplastida
Solyc01g095650.4.1 No alias histone H3 variant (CENH3) 0.03 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.06 Archaeplastida
Solyc05g051500.4.1 No alias histone (H3) 0.04 Archaeplastida
Solyc10g008910.1.1 No alias histone (H3) 0.09 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.1 Archaeplastida
Zm00001e008155_P001 No alias histone (H3) 0.06 Archaeplastida
Zm00001e008160_P001 No alias histone (H3) 0.04 Archaeplastida
Zm00001e016861_P001 No alias histone (H3) 0.07 Archaeplastida
Zm00001e018263_P001 No alias histone (H3) 0.05 Archaeplastida
Zm00001e019170_P001 No alias histone (H3) 0.04 Archaeplastida
Zm00001e036599_P001 No alias histone (H3) 0.05 Archaeplastida
Zm00001e040856_P001 No alias histone (H3) 0.09 Archaeplastida
Zm00001e040876_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!