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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 520.0)
Gene families : OG0109015 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0092921 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073827 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_19933g0010 | |
| Cluster | HCCA: Cluster_197 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 430 | 458 |
| IPR002885 | Pentatricopeptide_repeat | 179 | 206 |
| IPR002885 | Pentatricopeptide_repeat | 208 | 238 |
| IPR002885 | Pentatricopeptide_repeat | 81 | 102 |
| IPR002885 | Pentatricopeptide_repeat | 239 | 269 |
| IPR002885 | Pentatricopeptide_repeat | 680 | 706 |
| IPR002885 | Pentatricopeptide_repeat | 374 | 399 |
| IPR002885 | Pentatricopeptide_repeat | 402 | 427 |
| IPR002885 | Pentatricopeptide_repeat | 270 | 298 |
| IPR032867 | DYW_dom | 710 | 802 |
| IPR002885 | Pentatricopeptide_repeat | 462 | 509 |
| IPR002885 | Pentatricopeptide_repeat | 299 | 346 |
| IPR002885 | Pentatricopeptide_repeat | 104 | 152 |
| IPR002885 | Pentatricopeptide_repeat | 565 | 601 |
| No external refs found! |