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  5. MA_19934g0010

MA_19934g0010


Description : transcription factor (AS2/LOB)


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_19934g0010
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00088960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AT1G68510 LBD42 LOB domain-containing protein 42 0.04 Archaeplastida
AT3G49940 LBD38 LOB domain-containing protein 38 0.02 Archaeplastida
GSVIVT01008284001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01009360001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01011895001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01037853001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
Gb_36943 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os01g03890.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os03g41330.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_223267g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_70989g0010 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Pp3c18_9980V3.1 No alias LOB domain-containing protein 37 0.02 Archaeplastida
Pp3c5_6300V3.1 No alias LOB domain-containing protein 37 0.02 Archaeplastida
Smo37570 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Solyc02g085910.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e001981_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e005129_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e017028_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 4 100
No external refs found!