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Description : transcription factor (MADS/AGL)
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_20180g0010 | |
| Cluster | HCCA: Cluster_157 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G17310 | No alias | MADS-box transcription factor family protein | 0.02 | Archaeplastida | |
| AT1G26310 | AGL10, CAL1, CAL | K-box region and MADS-box transcription factor family protein | 0.04 | Archaeplastida | |
| AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.05 | Archaeplastida | |
| AT5G62165 | AGL42 | AGAMOUS-like 42 | 0.03 | Archaeplastida | |
| GSVIVT01009171001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
| GSVIVT01015641001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
| GSVIVT01018446001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | Archaeplastida | |
| GSVIVT01022182001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
| GSVIVT01033253001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
| LOC_Os06g06750.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| LOC_Os07g01820.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_101463g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_130755g0010 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_13933g0010 | No alias | transcription factor (MADS/AGL) | 0.05 | Archaeplastida | |
| MA_51624g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| Pp3c3_31770V3.1 | No alias | AGAMOUS-like 104 | 0.02 | Archaeplastida | |
| Pp3c8_6920V3.1 | No alias | AGAMOUS-like 66 | 0.02 | Archaeplastida | |
| Pp3c9_1370V3.1 | No alias | AGAMOUS-like 66 | 0.02 | Archaeplastida | |
| Solyc03g114840.3.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc04g005320.3.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc05g012020.4.1 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Solyc08g067230.4.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Zm00001e032487_P001 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 42 | 89 |
| No external refs found! |