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  5. MA_201864g0010

MA_201864g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_201864g0010

Target Alias Description ECC score Gene Family Method Actions
AT2G17730 NIP2 NEP-interacting protein 2 0.01 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Cre01.g000700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20666 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.01 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.01 Archaeplastida
LOC_Os01g11490.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g22080.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g11860.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34620.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os10g30310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_189618g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_393170g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_465316g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e013412_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e023234_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 141 184
No external refs found!