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  5. MA_202067g0010

MA_202067g0010


Description : component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex


Gene families : OG0003114 (Archaeplastida) Phylogenetic Tree(s): OG0003114_tree ,
OG_05_0002720 (LandPlants) Phylogenetic Tree(s): OG_05_0002720_tree ,
OG_06_0002572 (SeedPlants) Phylogenetic Tree(s): OG_06_0002572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_202067g0010
Cluster HCCA: Cluster_543

Target Alias Description ECC score Gene Family Method Actions
AT1G13190 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Archaeplastida
AT5G55670 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Archaeplastida
Cre08.g384950 No alias No description available 0.01 Archaeplastida
LOC_Os08g38240.1 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.03 Archaeplastida
Mp3g08890.1 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.08 Archaeplastida
Solyc07g065510.4.1 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.02 Archaeplastida
Zm00001e003418_P002 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.03 Archaeplastida
Zm00001e024332_P002 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 192 261
No external refs found!