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  5. AT5G41630

AT5G41630


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G41630
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.03 Archaeplastida
AT1G47920 No alias RNI-like superfamily protein 0.04 Archaeplastida
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT1G64540 No alias F-box/FBD-like domains containing protein 0.05 Archaeplastida
AT2G29930 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.04 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT3G44090 No alias F-box family protein 0.11 Archaeplastida
AT3G44180 No alias syntaxin-related family protein 0.01 Archaeplastida
AT3G49150 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G54160 No alias RNI-like superfamily protein 0.04 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT3G58880 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G58920 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G58960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT3G59160 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59170 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G59190 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G59200 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.09 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.07 Archaeplastida
AT3G59250 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT3G62440 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT4G00320 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT4G13960 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT5G25860 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.05 Archaeplastida
AT5G38396 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
MF GO:0015386 potassium:proton antiporter activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0022821 potassium ion antiporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 176 200
IPR001810 F-box_dom 13 45
No external refs found!