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Description : Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica (sp|q9lst6|psb2_orysj : 162.0)
Gene families : OG0003655 (Archaeplastida) Phylogenetic Tree(s): OG0003655_tree ,
OG_05_0004102 (LandPlants) Phylogenetic Tree(s): OG_05_0004102_tree ,
OG_06_0004916 (SeedPlants) Phylogenetic Tree(s): OG_06_0004916_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_20372g0010 | |
| Cluster | HCCA: Cluster_451 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G14800 | PBD2 | 20S proteasome beta subunit D2 | 0.05 | Archaeplastida | |
| LOC_Os03g48930.1 | No alias | component beta type-4 of 26S proteasome | 0.03 | Archaeplastida | |
| Mp4g04320.1 | No alias | component beta type-4 of 26S proteasome | 0.04 | Archaeplastida | |
| Pp3c25_9390V3.1 | No alias | 20S proteasome beta subunit D1 | 0.03 | Archaeplastida | |
| Solyc09g082320.3.1 | No alias | component beta type-4 of 26S proteasome | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004298 | threonine-type endopeptidase activity | IEA | Interproscan |
| CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Neighborhood |
| CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
| BP | GO:0006808 | regulation of nitrogen utilization | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Neighborhood |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0030099 | myeloid cell differentiation | IEP | Neighborhood |
| BP | GO:0030154 | cell differentiation | IEP | Neighborhood |
| BP | GO:0030218 | erythrocyte differentiation | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0048869 | cellular developmental process | IEP | Neighborhood |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001353 | Proteasome_sua/b | 3 | 89 |
| No external refs found! |