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  5. MA_203992g0010

MA_203992g0010


Description : pectate lyase


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_203992g0010
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.06 Archaeplastida
AT1G04680 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G30350 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT1G67750 No alias Pectate lyase family protein 0.03 Archaeplastida
AT3G07010 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G24670 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G54920 PMR6 Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT4G13210 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT4G13710 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT4G24780 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G55720 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT5G63180 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01000592001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01014682001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
GSVIVT01016209001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01029048001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.02 Archaeplastida
LOC_Os04g05050.1 No alias pectate lyase 0.05 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.04 Archaeplastida
LOC_Os10g31910.1 No alias pectate lyase 0.02 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.04 Archaeplastida
MA_10353668g0010 No alias pectate lyase 0.04 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.04 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.03 Archaeplastida
MA_204440g0010 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 Archaeplastida
MA_476625g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.07 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.04 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.03 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.04 Archaeplastida
Mp3g01000.1 No alias pectate lyase 0.02 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.05 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.05 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Pp3c13_1640V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c17_16370V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c1_35100V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c21_16990V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
Smo439243 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc03g058910.3.1 No alias pectate lyase 0.02 Archaeplastida
Solyc03g111690.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc05g007080.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.05 Archaeplastida
Zm00001e024959_P001 No alias pectate lyase 0.02 Archaeplastida
Zm00001e037311_P001 No alias pectate lyase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 167 330
No external refs found!