AT5G41820 (RGTA2, ATRGTA2)


Aliases : RGTA2, ATRGTA2

Description : RAB geranylgeranyl transferase alpha subunit 2


Gene families : OG0004459 (Archaeplastida) Phylogenetic Tree(s): OG0004459_tree ,
OG_05_0004651 (LandPlants) Phylogenetic Tree(s): OG_05_0004651_tree ,
OG_06_0006097 (SeedPlants) Phylogenetic Tree(s): OG_06_0006097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G41820
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
MA_48992g0010 No alias subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006360 transcription by RNA polymerase I IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002088 Prenyl_trans_a 172 199
IPR002088 Prenyl_trans_a 87 114
IPR002088 Prenyl_trans_a 149 163
No external refs found!