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Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 82.0)
Gene families : OG0004846 (Archaeplastida) Phylogenetic Tree(s): OG0004846_tree ,
OG_05_0005236 (LandPlants) Phylogenetic Tree(s): OG_05_0005236_tree ,
OG_06_0006502 (SeedPlants) Phylogenetic Tree(s): OG_06_0006502_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_20586g0020 | |
| Cluster | HCCA: Cluster_492 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c1_20810V3.1 | No alias | bromo-adjacent homology (BAH) domain-containing protein | 0.02 | Archaeplastida | |
| Smo438037 | No alias | No description available | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001025 | BAH_dom | 9 | 121 |
| No external refs found! |