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  5. MA_208026g0010

MA_208026g0010


Description : no hits & (original description: none)


Gene families : OG0000652 (Archaeplastida) Phylogenetic Tree(s): OG0000652_tree ,
OG_05_0004656 (LandPlants) Phylogenetic Tree(s): OG_05_0004656_tree ,
OG_06_0005772 (SeedPlants) Phylogenetic Tree(s): OG_06_0005772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_208026g0010
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00239150 evm_27.TU.AmTr_v1... Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00025p00188660 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
AMTR_s00119p00113390 evm_27.TU.AmTr_v1... Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G16800 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
AT4G30100 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Cpa|evm.model.tig00000053.4 No alias Regulator of nonsense transcripts 1 homolog... 0.03 Archaeplastida
GSVIVT01009001001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01014679001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01029557001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.08 Archaeplastida
Gb_33974 No alias helicase (SEN1) 0.06 Archaeplastida
LOC_Os09g32190.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_13389g0020 No alias helicase (SEN1) 0.09 Archaeplastida
MA_88596g0010 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g19520.1 No alias helicase (SEN1) 0.02 Archaeplastida
Mp7g11100.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c10_25870V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c19_7860V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Smo444379 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc03g124010.3.1 No alias helicase (SEN1) 0.05 Archaeplastida
Solyc04g072830.4.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g072840.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e002590_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e034571_P001 No alias helicase (SEN1) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!