AT1G24200

Description : Paired amphipathic helix (PAH2) superfamily protein

Gene families : OG0012987 (Archaeplastida) Phylogenetic Tree(s): OG0012987_tree ,
OG_05_0003484 (LandPlants) Phylogenetic Tree(s): OG_05_0003484_tree ,
OG_06_0002865 (SeedPlants) Phylogenetic Tree(s): OG_06_0002865_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G24200
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G70030	No alias	Paired amphipathic helix (PAH2) superfamily protein	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005887	integral component of plasma membrane	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009555	pollen development	IEP	Neighborhood
BP	GO:0010208	pollen wall assembly	IEP	Neighborhood
BP	GO:0010584	pollen exine formation	IEP	Neighborhood
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Neighborhood
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015398	high-affinity secondary active ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015695	organic cation transport	IEP	Neighborhood
BP	GO:0015749	monosaccharide transmembrane transport	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0034219	carbohydrate transmembrane transport	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
MF	GO:0051119	sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0072488	ammonium transmembrane transport	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003822	PAH	31	75
IPR003822	PAH	115	158

External Links

No external refs found!

AT1G24200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation