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  5. MA_214607g0010

MA_214607g0010


Description : cohesin cofactor (PDS5)


Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0002118 (LandPlants) Phylogenetic Tree(s): OG_05_0002118_tree ,
OG_06_0002144 (SeedPlants) Phylogenetic Tree(s): OG_06_0002144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_214607g0010
Cluster HCCA: Cluster_437

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
AT1G77600 No alias ARM repeat superfamily protein 0.03 Archaeplastida
AT5G47690 No alias binding 0.06 Archaeplastida
Cpa|evm.model.tig00000076.96 No alias No description available 0.02 Archaeplastida
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.04 Archaeplastida
GSVIVT01002824001 No alias No description available 0.04 Archaeplastida
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
Gb_12481 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Gb_23673 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Pp3c10_24900V3.1 No alias binding 0.06 Archaeplastida
Pp3c20_23000V3.1 No alias binding 0.02 Archaeplastida
Pp3c23_10270V3.1 No alias binding 0.07 Archaeplastida
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Zm00001e015094_P002 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Zm00001e030989_P001 No alias cohesin cofactor (PDS5) 0.06 Archaeplastida
Zm00001e036853_P003 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR026003 Cohesin_HEAT 121 140
No external refs found!