MA_218657g0010

Description : isoprenyl diphosphate synthase

Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0010104 (LandPlants) Phylogenetic Tree(s): OG_05_0010104_tree ,
OG_06_0008457 (SeedPlants) Phylogenetic Tree(s): OG_06_0008457_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_218657g0010
Cluster	HCCA: Cluster_281

Target	Alias	Description	ECC score	Gene Family Method
AT1G49530	GGPS6	geranylgeranyl pyrophosphate synthase 6	0.03	Archaeplastida
AT2G23800	GGPS2, GGPS5	geranylgeranyl pyrophosphate synthase 2	0.03	Archaeplastida
AT3G14510	No alias	Polyprenyl synthetase family protein	0.03	Archaeplastida
AT3G14530	No alias	Terpenoid synthases superfamily protein	0.04	Archaeplastida
AT3G14550	GGPS3	geranylgeranyl pyrophosphate synthase 3	0.05	Archaeplastida
Gb_21550	No alias	isoprenyl diphosphate synthase	0.02	Archaeplastida
Gb_39712	No alias	isoprenyl diphosphate synthase	0.02	Archaeplastida
LOC_Os01g14630.1	No alias	isoprenyl diphosphate synthase	0.03	Archaeplastida
Solyc02g085700.1.1	No alias	catalytic subunit of geranyl diphosphate synthase...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
BP	GO:0006099	tricarboxylic acid cycle	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
BP	GO:0015977	carbon fixation	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000092	Polyprenyl_synt	3	111

External Links

No external refs found!