MA_219740g0010

Description : component RPL8 of LSU proteome component

Gene families : OG0001917 (Archaeplastida) Phylogenetic Tree(s): OG0001917_tree ,
OG_05_0001773 (LandPlants) Phylogenetic Tree(s): OG_05_0001773_tree ,
OG_06_0001930 (SeedPlants) Phylogenetic Tree(s): OG_06_0001930_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_219740g0010
Cluster	HCCA: Cluster_289

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00109050	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	Archaeplastida
AT2G18020	EMB2296	Ribosomal protein L2 family	0.04	Archaeplastida
AT4G36130	No alias	Ribosomal protein L2 family	0.08	Archaeplastida
Cpa\|evm.model.tig00020965.22	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	Archaeplastida
Cre12.g535851	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	Archaeplastida
GSVIVT01014552001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	Archaeplastida
LOC_Os12g38000.1	No alias	component RPL8 of LSU proteome component	0.07	Archaeplastida
Mp7g01860.1	No alias	component RPL8 of LSU proteome component	0.08	Archaeplastida
Mp7g08730.1	No alias	component RPL8 of LSU proteome component	0.08	Archaeplastida
Pp3c12_10200V3.1	No alias	Ribosomal protein L2 family	0.03	Archaeplastida
Pp3c13_21760V3.1	No alias	Ribosomal protein L2 family	0.04	Archaeplastida
Pp3c13_23630V3.1	No alias	Ribosomal protein L2 family	0.09	Archaeplastida
Pp3c4_12690V3.1	No alias	Ribosomal protein L2 family	0.03	Archaeplastida
Pp3c4_12720V3.1	No alias	Ribosomal protein L2 family	0.03	Archaeplastida
Smo170971	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	Archaeplastida
Solyc07g063890.2.1	No alias	component RPL8 of LSU proteome component	0.1	Archaeplastida
Solyc12g005330.2.1	No alias	component RPL8 of LSU proteome component	0.1	Archaeplastida
Zm00001e002931_P001	No alias	component RPL8 of LSU proteome component	0.05	Archaeplastida
Zm00001e018178_P001	No alias	component RPL8 of LSU proteome component	0.05	Archaeplastida
Zm00001e033350_P001	No alias	component RPL8 of LSU proteome component	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
CC	GO:0005759	mitochondrial matrix	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006480	N-terminal protein amino acid methylation	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
BP	GO:0031365	N-terminal protein amino acid modification	IEP	Neighborhood
CC	GO:0031974	membrane-enclosed lumen	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
CC	GO:0043233	organelle lumen	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
CC	GO:0070013	intracellular organelle lumen	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_L2_C	1	66

External Links

No external refs found!

MA_219740g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation