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  5. MA_222729g0010

MA_222729g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_222729g0010
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00198340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G49230 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G34000 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.02 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01008756001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01024698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01038717001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_08091 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14762 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_20700 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_22087 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_33184 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.05 Archaeplastida
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.02 Archaeplastida
Gb_41385 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11490.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g50930.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_189618g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_393170g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_816764g0010 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo412609 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g095810.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105610.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g115465.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.01 Archaeplastida
Solyc04g074790.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc05g055390.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g051250.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc08g082680.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e016092_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031442_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e034829_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 111 154
No external refs found!