1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_22288g0010

MA_22288g0010


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0000257 (Archaeplastida) Phylogenetic Tree(s): OG0000257_tree ,
OG_05_0003698 (LandPlants) Phylogenetic Tree(s): OG_05_0003698_tree ,
OG_06_0004446 (SeedPlants) Phylogenetic Tree(s): OG_06_0004446_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_22288g0010
Cluster HCCA: Cluster_496

Target Alias Description ECC score Gene Family Method Actions
AT1G73100 SUVH3, SDG19 SU(VAR)3-9 homolog 3 0.03 Archaeplastida
Gb_31631 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
LOC_Os11g38900.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
MA_37876g0010 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.06 Archaeplastida
Pp3c4_9720V3.1 No alias SU(VAR)3-9 homolog 4 0.03 Archaeplastida
Solyc02g094520.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e028400_P002 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 82 200
No external refs found!