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  5. AT5G42840

AT5G42840


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0001348 (Archaeplastida) Phylogenetic Tree(s): OG0001348_tree ,
OG_05_0000867 (LandPlants) Phylogenetic Tree(s): OG_05_0000867_tree ,
OG_06_0000460 (SeedPlants) Phylogenetic Tree(s): OG_06_0000460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42840
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT2G19660 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT3G07000 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 Archaeplastida
AT3G27480 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT3G27490 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT3G27510 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT3G28650 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT3G43890 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT3G45530 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT4G01350 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT4G02190 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 Archaeplastida
AT4G11390 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G29624 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 Archaeplastida
AT5G54020 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G54050 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G59920 ULI3 Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004031 aldehyde oxidase activity IEP Neighborhood
MF GO:0004040 amidase activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006714 sesquiterpenoid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009687 abscisic acid metabolic process IEP Neighborhood
BP GO:0009688 abscisic acid biosynthetic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009691 cytokinin biosynthetic process IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
CC GO:0010319 stromule IEP Neighborhood
BP GO:0010393 galacturonan metabolic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Neighborhood
BP GO:0016145 S-glycoside catabolic process IEP Neighborhood
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019759 glycosinolate catabolic process IEP Neighborhood
BP GO:0019762 glucosinolate catabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0043288 apocarotenoid metabolic process IEP Neighborhood
BP GO:0043289 apocarotenoid biosynthetic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0045488 pectin metabolic process IEP Neighborhood
MF GO:0046715 active borate transmembrane transporter activity IEP Neighborhood
MF GO:0050284 sinapate 1-glucosyltransferase activity IEP Neighborhood
BP GO:0050898 nitrile metabolic process IEP Neighborhood
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Neighborhood
BP GO:0052546 cell wall pectin metabolic process IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0080028 nitrile biosynthetic process IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
BP GO:1902644 tertiary alcohol metabolic process IEP Neighborhood
BP GO:1902645 tertiary alcohol biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004146 DC1 371 418
IPR004146 DC1 60 108
IPR004146 DC1 173 221
IPR004146 DC1 288 335
IPR004146 DC1 235 278
IPR004146 DC1 121 162
IPR004146 DC1 541 590
No external refs found!