AT5G43270 (SPL2)

Aliases : SPL2

Description : squamosa promoter binding protein-like 2

Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0019868 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G43270
Cluster	HCCA: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00197010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.04	Archaeplastida
AMTR_s00062p00211520	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.02	Archaeplastida
AT3G15270	SPL5	squamosa promoter binding protein-like 5	0.09	Archaeplastida
Cre02.g104700	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.02	Archaeplastida
LOC_Os04g46580.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
LOC_Os08g39890.1	No alias	transcription factor (SBP)	0.04	Archaeplastida
LOC_Os08g41940.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
LOC_Os09g31438.1	No alias	transcription factor (SBP)	0.04	Archaeplastida
LOC_Os09g32944.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
MA_22749g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc02g077920.4.1	No alias	transcription factor (SBP)	0.06	Archaeplastida
Zm00001e013795_P002	No alias	transcription factor (SBP)	0.04	Archaeplastida
Zm00001e021962_P003	No alias	transcription factor (SBP)	0.06	Archaeplastida
Zm00001e034537_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e035060_P002	No alias	transcription factor (SBP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040034	regulation of development, heterochronic	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048506	regulation of timing of meristematic phase transition	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IMP	Interproscan
BP	GO:0048653	anther development	IGI	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000212	meiotic spindle organization	IEP	Neighborhood
MF	GO:0003999	adenine phosphoribosyltransferase activity	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
BP	GO:0006144	purine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006168	adenine salvage	IEP	Neighborhood
BP	GO:0007140	male meiotic nuclear division	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Neighborhood
CC	GO:0009503	thylakoid light-harvesting complex	IEP	Neighborhood
CC	GO:0009517	PSII associated light-harvesting complex II	IEP	Neighborhood
BP	GO:0009687	abscisic acid metabolic process	IEP	Neighborhood
BP	GO:0009688	abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009911	positive regulation of flower development	IEP	Neighborhood
BP	GO:0010022	meristem determinacy	IEP	Neighborhood
BP	GO:0010025	wax biosynthetic process	IEP	Neighborhood
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010117	photoprotection	IEP	Neighborhood
BP	GO:0010154	fruit development	IEP	Neighborhood
BP	GO:0010166	wax metabolic process	IEP	Neighborhood
BP	GO:0010197	polar nucleus fusion	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
BP	GO:0010358	leaf shaping	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016122	xanthophyll metabolic process	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
CC	GO:0030076	light-harvesting complex	IEP	Neighborhood
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	Neighborhood
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032928	regulation of superoxide anion generation	IEP	Neighborhood
BP	GO:0043096	purine nucleobase salvage	IEP	Neighborhood
BP	GO:0043101	purine-containing compound salvage	IEP	Neighborhood
BP	GO:0043288	apocarotenoid metabolic process	IEP	Neighborhood
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
BP	GO:0046083	adenine metabolic process	IEP	Neighborhood
BP	GO:0046084	adenine biosynthetic process	IEP	Neighborhood
BP	GO:0046112	nucleobase biosynthetic process	IEP	Neighborhood
MF	GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048438	floral whorl development	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0048467	gynoecium development	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0051026	chiasma assembly	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0060284	regulation of cell development	IEP	Neighborhood
BP	GO:0080127	fruit septum development	IEP	Neighborhood
MF	GO:0080133	midchain alkane hydroxylase activity	IEP	Neighborhood
BP	GO:0090322	regulation of superoxide metabolic process	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0106130	purine phosphoribosyltransferase activity	IEP	Neighborhood
BP	GO:0140013	meiotic nuclear division	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Neighborhood
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	Neighborhood
BP	GO:1905328	plant septum development	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000039	regulation of trichome morphogenesis	IEP	Neighborhood
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	169	242

External Links

No external refs found!

AT5G43270 (SPL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation