MA_24261g0010


Description : histone (H3)


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree ,
OG_06_0000125 (SeedPlants) Phylogenetic Tree(s): OG_06_0000125_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_24261g0010
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AT1G09200 No alias Histone superfamily protein 0.04 Archaeplastida
AT1G19890 ATMGH3, MGH3 male-gamete-specific histone H3 0.03 Archaeplastida
AT3G27360 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G10390 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G10400 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G65360 No alias Histone superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000241.39 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 Archaeplastida
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre16.g649900 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.04 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.04 Archaeplastida
Gb_15586 No alias histone (H3) 0.02 Archaeplastida
Gb_27618 No alias histone (H3) 0.04 Archaeplastida
Gb_29026 No alias histone (H3) 0.03 Archaeplastida
Gb_29027 No alias histone (H3) 0.02 Archaeplastida
Gb_30564 No alias histone (H3) 0.06 Archaeplastida
Gb_36661 No alias histone (H3) 0.05 Archaeplastida
Gb_40804 No alias histone (H3) 0.04 Archaeplastida
LOC_Os01g64640.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os02g25910.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os03g27310.2 No alias histone (H3) 0.03 Archaeplastida
LOC_Os04g34240.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os05g41080.1 No alias histone H3 variant (CENH3) 0.03 Archaeplastida
LOC_Os06g04030.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os06g06460.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os06g06480.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os11g05730.1 No alias histone (H3) 0.04 Archaeplastida
MA_10432805g0020 No alias histone (H3) 0.03 Archaeplastida
MA_113838g0010 No alias histone (H3) 0.05 Archaeplastida
MA_197719g0010 No alias histone (H3) 0.04 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.06 Archaeplastida
MA_561217g0010 No alias histone (H3) 0.04 Archaeplastida
MA_871602g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g09090.1 No alias histone (H3) 0.04 Archaeplastida
Mp7g10730.1 No alias histone (H3) 0.03 Archaeplastida
Mp7g18030.1 No alias histone (H3) 0.02 Archaeplastida
Pp3c18_12300V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c18_14481V3.1 No alias Histone superfamily protein 0.04 Archaeplastida
Pp3c1_20640V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c1_20670V3.1 No alias Histone superfamily protein 0.04 Archaeplastida
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.05 Archaeplastida
Pp3c24_11100V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c3_37020V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Smo269004 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.04 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.03 Archaeplastida
Solyc04g081145.1.1 No alias histone (H3) 0.03 Archaeplastida
Solyc10g008910.1.1 No alias histone (H3) 0.05 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.04 Archaeplastida
Zm00001e008155_P001 No alias histone (H3) 0.05 Archaeplastida
Zm00001e008160_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e016861_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e019170_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e040856_P001 No alias histone (H3) 0.04 Archaeplastida
Zm00001e040876_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 52 180
No external refs found!