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Description : Pre-mRNA cleavage complex II
Gene families : OG0001781 (Archaeplastida) Phylogenetic Tree(s): OG0001781_tree ,
OG_05_0026682 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0025100 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G43620 | |
| Cluster | HCCA: Cluster_80 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000322 | storage vacuole | IEP | Neighborhood |
| CC | GO:0000326 | protein storage vacuole | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | IEP | Neighborhood |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Neighborhood |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Neighborhood |
| MF | GO:0004021 | L-alanine:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Neighborhood |
| MF | GO:0004360 | glutamine-fructose-6-phosphate transaminase (isomerizing) activity | IEP | Neighborhood |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0004838 | L-tyrosine:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| CC | GO:0005673 | transcription factor TFIIE complex | IEP | Neighborhood |
| CC | GO:0005945 | 6-phosphofructokinase complex | IEP | Neighborhood |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
| BP | GO:0006041 | glucosamine metabolic process | IEP | Neighborhood |
| BP | GO:0006042 | glucosamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006865 | amino acid transport | IEP | Neighborhood |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0007135 | meiosis II | IEP | Neighborhood |
| BP | GO:0007140 | male meiotic nuclear division | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Neighborhood |
| MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
| MF | GO:0008793 | aromatic-amino-acid:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009408 | response to heat | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009641 | shade avoidance | IEP | Neighborhood |
| BP | GO:0009642 | response to light intensity | IEP | Neighborhood |
| BP | GO:0009648 | photoperiodism | IEP | Neighborhood |
| BP | GO:0009683 | indoleacetic acid metabolic process | IEP | Neighborhood |
| BP | GO:0009684 | indoleacetic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009791 | post-embryonic development | IEP | Neighborhood |
| BP | GO:0009850 | auxin metabolic process | IEP | Neighborhood |
| BP | GO:0009851 | auxin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009896 | positive regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0009908 | flower development | IEP | Neighborhood |
| BP | GO:0010078 | maintenance of root meristem identity | IEP | Neighborhood |
| BP | GO:0010098 | suspensor development | IEP | Neighborhood |
| BP | GO:0010214 | seed coat development | IEP | Neighborhood |
| BP | GO:0010286 | heat acclimation | IEP | Neighborhood |
| MF | GO:0010326 | methionine-oxo-acid transaminase activity | IEP | Neighborhood |
| BP | GO:0010588 | cotyledon vascular tissue pattern formation | IEP | Neighborhood |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
| MF | GO:0015112 | nitrate transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
| BP | GO:0015849 | organic acid transport | IEP | Neighborhood |
| BP | GO:0015939 | pantothenate metabolic process | IEP | Neighborhood |
| BP | GO:0015940 | pantothenate biosynthetic process | IEP | Neighborhood |
| MF | GO:0016647 | oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Neighborhood |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
| MF | GO:0016906 | sterol 3-beta-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0019842 | vitamin binding | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030118 | clathrin coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Neighborhood |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0034754 | cellular hormone metabolic process | IEP | Neighborhood |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | Neighborhood |
| BP | GO:0042435 | indole-containing compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0042644 | chloroplast nucleoid | IEP | Neighborhood |
| CC | GO:0042646 | plastid nucleoid | IEP | Neighborhood |
| BP | GO:0043090 | amino acid import | IEP | Neighborhood |
| BP | GO:0045732 | positive regulation of protein catabolic process | IEP | Neighborhood |
| BP | GO:0046349 | amino sugar biosynthetic process | IEP | Neighborhood |
| MF | GO:0046592 | polyamine oxidase activity | IEP | Neighborhood |
| BP | GO:0046942 | carboxylic acid transport | IEP | Neighborhood |
| MF | GO:0047312 | L-phenylalanine:pyruvate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0047635 | alanine-oxo-acid transaminase activity | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0048467 | gynoecium development | IEP | Neighborhood |
| BP | GO:0048571 | long-day photoperiodism | IEP | Neighborhood |
| BP | GO:0048573 | photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048574 | long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048578 | positive regulation of long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048586 | regulation of long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048608 | reproductive structure development | IEP | Neighborhood |
| MF | GO:0050048 | L-leucine:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0050362 | L-tryptophan:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051445 | regulation of meiotic cell cycle | IEP | Neighborhood |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0061983 | meiosis II cell cycle process | IEP | Neighborhood |
| MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
| MF | GO:0070529 | L-tryptophan aminotransferase activity | IEP | Neighborhood |
| MF | GO:0070546 | L-phenylalanine aminotransferase activity | IEP | Neighborhood |
| MF | GO:0070547 | L-tyrosine aminotransferase activity | IEP | Neighborhood |
| MF | GO:0070548 | L-glutamine aminotransferase activity | IEP | Neighborhood |
| BP | GO:0080022 | primary root development | IEP | Neighborhood |
| MF | GO:0080054 | low-affinity nitrate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0080097 | L-tryptophan:pyruvate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0080098 | L-tyrosine:pyruvate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0080099 | L-methionine:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0080100 | L-glutamine:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| MF | GO:0080130 | L-phenylalanine:2-oxoglutarate aminotransferase activity | IEP | Neighborhood |
| BP | GO:0090567 | reproductive shoot system development | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0140013 | meiotic nuclear division | IEP | Neighborhood |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901073 | glucosamine-containing compound biosynthetic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:2000028 | regulation of photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:2000241 | regulation of reproductive process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |