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  5. MA_26070g0010

MA_26070g0010


Description : component NOT4 of mRNA deadenylation CCR4-NOT complex


Gene families : OG0002795 (Archaeplastida) Phylogenetic Tree(s): OG0002795_tree ,
OG_05_0002922 (LandPlants) Phylogenetic Tree(s): OG_05_0002922_tree ,
OG_06_0002646 (SeedPlants) Phylogenetic Tree(s): OG_06_0002646_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_26070g0010
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001065.17 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 Archaeplastida
GSVIVT01025102001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
LOC_Os12g01190.2 No alias component NOT4 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida
Solyc04g049840.4.1 No alias component NOT4 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida
Zm00001e009304_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020808_P001 No alias component NOT4 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 240 301
No external refs found!