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MA_26803g0010


Description : C3H zinc finger transcription factor


Gene families : OG0001099 (Archaeplastida) Phylogenetic Tree(s): OG0001099_tree ,
OG_05_0001093 (LandPlants) Phylogenetic Tree(s): OG_05_0001093_tree ,
OG_06_0016880 (SeedPlants) Phylogenetic Tree(s): OG_06_0016880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_26803g0010
Cluster HCCA: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00054910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 Archaeplastida
GSVIVT01025360001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
Gb_25567 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
LOC_Os02g10080.1 No alias C3H zinc finger transcription factor 0.05 Archaeplastida
Solyc01g014850.4.1 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
Solyc03g063200.3.1 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Zm00001e006629_P001 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037586_P002 No alias C3H zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 256 282
IPR000571 Znf_CCCH 191 214
No external refs found!