Aliases : OSB3
Description : organellar single-stranded DNA binding protein 3
Gene families : OG0001359 (Archaeplastida) Phylogenetic Tree(s): OG0001359_tree ,
OG_05_0001061 (LandPlants) Phylogenetic Tree(s): OG_05_0001061_tree ,
OG_06_0010157 (SeedPlants) Phylogenetic Tree(s): OG_06_0010157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G44785 | |
Cluster | HCCA: Cluster_247 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01000719001 | No alias | Cell cycle.organelle machineries.DNA... | 0.06 | Archaeplastida | |
Gb_13980 | No alias | ssDNA-binding protein (OSB) | 0.05 | Archaeplastida | |
LOC_Os03g43420.1 | No alias | ssDNA-binding protein (OSB) | 0.05 | Archaeplastida | |
Mp5g04990.1 | No alias | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.03 | Archaeplastida | |
Zm00001e012422_P001 | No alias | ssDNA-binding protein (OSB) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005739 | mitochondrion | IDA | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000023 | maltose metabolic process | IEP | Neighborhood |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0000373 | Group II intron splicing | IEP | Neighborhood |
BP | GO:0000470 | maturation of LSU-rRNA | IEP | Neighborhood |
BP | GO:0000488 | maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | IEP | Neighborhood |
BP | GO:0000489 | maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | IEP | Neighborhood |
MF | GO:0001871 | pattern binding | IEP | Neighborhood |
BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Neighborhood |
MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
MF | GO:0004326 | tetrahydrofolylpolyglutamate synthase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
MF | GO:0004556 | alpha-amylase activity | IEP | Neighborhood |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0004825 | methionine-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0005982 | starch metabolic process | IEP | Neighborhood |
BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
BP | GO:0006268 | DNA unwinding involved in DNA replication | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006730 | one-carbon metabolic process | IEP | Neighborhood |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006996 | organelle organization | IEP | Neighborhood |
BP | GO:0007005 | mitochondrion organization | IEP | Neighborhood |
BP | GO:0007006 | mitochondrial membrane organization | IEP | Neighborhood |
BP | GO:0007007 | inner mitochondrial membrane organization | IEP | Neighborhood |
BP | GO:0007020 | microtubule nucleation | IEP | Neighborhood |
BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009303 | rRNA transcription | IEP | Neighborhood |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
CC | GO:0009501 | amyloplast | IEP | Neighborhood |
CC | GO:0009532 | plastid stroma | IEP | Neighborhood |
CC | GO:0009570 | chloroplast stroma | IEP | Neighborhood |
BP | GO:0009657 | plastid organization | IEP | Neighborhood |
BP | GO:0009658 | chloroplast organization | IEP | Neighborhood |
BP | GO:0009668 | plastid membrane organization | IEP | Neighborhood |
CC | GO:0009707 | chloroplast outer membrane | IEP | Neighborhood |
BP | GO:0009790 | embryo development | IEP | Neighborhood |
BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Neighborhood |
BP | GO:0009902 | chloroplast relocation | IEP | Neighborhood |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0010020 | chloroplast fission | IEP | Neighborhood |
BP | GO:0010021 | amylopectin biosynthetic process | IEP | Neighborhood |
BP | GO:0010027 | thylakoid membrane organization | IEP | Neighborhood |
BP | GO:0010109 | regulation of photosynthesis | IEP | Neighborhood |
BP | GO:0010197 | polar nucleus fusion | IEP | Neighborhood |
CC | GO:0010368 | chloroplast isoamylase complex | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016160 | amylase activity | IEP | Neighborhood |
MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
BP | GO:0016485 | protein processing | IEP | Neighborhood |
BP | GO:0016556 | mRNA modification | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
MF | GO:0016874 | ligase activity | IEP | Neighborhood |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
MF | GO:0019156 | isoamylase activity | IEP | Neighborhood |
BP | GO:0019252 | starch biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
BP | GO:0019750 | chloroplast localization | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
MF | GO:0030247 | polysaccharide binding | IEP | Neighborhood |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
CC | GO:0031312 | extrinsic component of organelle membrane | IEP | Neighborhood |
BP | GO:0031425 | chloroplast RNA processing | IEP | Neighborhood |
CC | GO:0031897 | Tic complex | IEP | Neighborhood |
CC | GO:0031969 | chloroplast membrane | IEP | Neighborhood |
BP | GO:0032392 | DNA geometric change | IEP | Neighborhood |
BP | GO:0032508 | DNA duplex unwinding | IEP | Neighborhood |
BP | GO:0032544 | plastid translation | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
CC | GO:0035452 | extrinsic component of plastid membrane | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
CC | GO:0042170 | plastid membrane | IEP | Neighborhood |
BP | GO:0042372 | phylloquinone biosynthetic process | IEP | Neighborhood |
BP | GO:0042374 | phylloquinone metabolic process | IEP | Neighborhood |
BP | GO:0042407 | cristae formation | IEP | Neighborhood |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Neighborhood |
BP | GO:0042550 | photosystem I stabilization | IEP | Neighborhood |
MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
BP | GO:0042780 | tRNA 3'-end processing | IEP | Neighborhood |
MF | GO:0042781 | 3'-tRNA processing endoribonuclease activity | IEP | Neighborhood |
BP | GO:0042794 | plastid rRNA transcription | IEP | Neighborhood |
CC | GO:0043033 | isoamylase complex | IEP | Neighborhood |
BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Neighborhood |
BP | GO:0043572 | plastid fission | IEP | Neighborhood |
MF | GO:0043621 | protein self-association | IEP | Neighborhood |
BP | GO:0043628 | ncRNA 3'-end processing | IEP | Neighborhood |
BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
BP | GO:0044093 | positive regulation of molecular function | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044434 | chloroplast part | IEP | Neighborhood |
CC | GO:0044435 | plastid part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
BP | GO:0045036 | protein targeting to chloroplast | IEP | Neighborhood |
BP | GO:0045037 | protein import into chloroplast stroma | IEP | Neighborhood |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0048285 | organelle fission | IEP | Neighborhood |
BP | GO:0048481 | plant ovule development | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
BP | GO:0051640 | organelle localization | IEP | Neighborhood |
BP | GO:0051644 | plastid localization | IEP | Neighborhood |
BP | GO:0051656 | establishment of organelle localization | IEP | Neighborhood |
BP | GO:0051667 | establishment of plastid localization | IEP | Neighborhood |
MF | GO:0052381 | tRNA dimethylallyltransferase activity | IEP | Neighborhood |
BP | GO:0061024 | membrane organization | IEP | Neighborhood |
BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
MF | GO:0070180 | large ribosomal subunit rRNA binding | IEP | Neighborhood |
BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
BP | GO:0072596 | establishment of protein localization to chloroplast | IEP | Neighborhood |
BP | GO:0072598 | protein localization to chloroplast | IEP | Neighborhood |
BP | GO:0080158 | obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0090351 | seedling development | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
BP | GO:0098781 | ncRNA transcription | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Neighborhood |
BP | GO:1901259 | chloroplast rRNA processing | IEP | Neighborhood |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
BP | GO:2000896 | amylopectin metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |