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  5. MA_28188g0010

MA_28188g0010


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_28188g0010
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00048p00125480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT2G06020 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012707001 No alias No description available 0.02 Archaeplastida
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Gb_01374 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Pp3c18_20920V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c22_8210V3.1 No alias Homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c24_7590V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e009653_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030689_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!