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AT5G44940


Description : F-box/RNI-like superfamily protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44940
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Archaeplastida
AT1G32020 No alias F-box family protein 0.07 Archaeplastida
AT1G60400 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT1G60410 No alias F-box family protein 0.03 Archaeplastida
AT1G66320 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT1G66640 No alias RNI-like superfamily protein 0.1 Archaeplastida
AT1G78750 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT1G80470 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT3G23955 No alias F-box family protein 0.05 Archaeplastida
AT5G22590 No alias Leucine Rich Repeat protein family 0.04 Archaeplastida
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Archaeplastida
AT5G22720 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 Archaeplastida
AT5G27750 No alias F-box/FBD-like domains containing protein 0.02 Archaeplastida
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.11 Archaeplastida
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.11 Archaeplastida
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 301 344
IPR001810 F-box_dom 7 43
No external refs found!