1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_285386g0010

MA_285386g0010


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 469.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0004751 (LandPlants) Phylogenetic Tree(s): OG_05_0004751_tree ,
OG_06_0003052 (SeedPlants) Phylogenetic Tree(s): OG_06_0003052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_285386g0010
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g59600... 0.04 Archaeplastida
AMTR_s00029p00204910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g19191,... 0.03 Archaeplastida
AMTR_s00029p00235510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.06 Archaeplastida
AMTR_s00077p00192220 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40720... 0.02 Archaeplastida
AMTR_s00098p00155650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39350... 0.03 Archaeplastida
AMTR_s00099p00036710 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71490... 0.02 Archaeplastida
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT1G20230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
AT4G20770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
AT4G38010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.06 Archaeplastida
AT5G08510 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
GSVIVT01000420001 No alias RNA processing.organelle machineries.RNA... 0.04 Archaeplastida
GSVIVT01003804001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 Archaeplastida
GSVIVT01004939001 No alias RNA processing.organelle machineries.RNA... 0.07 Archaeplastida
GSVIVT01007645001 No alias Pentatricopeptide repeat-containing protein ELI1,... 0.03 Archaeplastida
GSVIVT01007937001 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.06 Archaeplastida
GSVIVT01007974001 No alias Pentatricopeptide repeat-containing protein At5g61400... 0.07 Archaeplastida
GSVIVT01008537001 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 Archaeplastida
GSVIVT01010125001 No alias Putative pentatricopeptide repeat-containing protein... 0.08 Archaeplastida
GSVIVT01010647001 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.06 Archaeplastida
GSVIVT01011501001 No alias Pentatricopeptide repeat-containing protein At5g39350... 0.05 Archaeplastida
GSVIVT01011735001 No alias Pentatricopeptide repeat-containing protein At2g01510,... 0.04 Archaeplastida
GSVIVT01012174001 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.04 Archaeplastida
GSVIVT01015087001 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
GSVIVT01017075001 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.06 Archaeplastida
GSVIVT01019116001 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.11 Archaeplastida
GSVIVT01020929001 No alias Pentatricopeptide repeat-containing protein At1g04840... 0.05 Archaeplastida
GSVIVT01021015001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
GSVIVT01021023001 No alias RNA processing.organelle machineries.RNA... 0.06 Archaeplastida
GSVIVT01021774001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.04 Archaeplastida
GSVIVT01022230001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 Archaeplastida
GSVIVT01024493001 No alias Pentatricopeptide repeat-containing protein At4g39952,... 0.03 Archaeplastida
GSVIVT01024870001 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.04 Archaeplastida
GSVIVT01026881001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.09 Archaeplastida
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
GSVIVT01030054001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.07 Archaeplastida
GSVIVT01030080001 No alias RNA processing.organelle machineries.RNA... 0.05 Archaeplastida
GSVIVT01030443001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.04 Archaeplastida
GSVIVT01031265001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.11 Archaeplastida
GSVIVT01031266001 No alias Putative pentatricopeptide repeat-containing protein... 0.07 Archaeplastida
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 Archaeplastida
GSVIVT01036757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 Archaeplastida
GSVIVT01036943001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.04 Archaeplastida
Gb_00862 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_02373 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 Archaeplastida
Gb_03473 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_03570 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_04077 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_04091 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_04167 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_05554 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_06576 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_08036 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_09741 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_10478 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.1 Archaeplastida
Gb_11545 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_12585 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.05 Archaeplastida
Gb_13221 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_13599 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 Archaeplastida
Gb_17177 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_18149 No alias OTP70 plastidial RNA splicing factor 0.03 Archaeplastida
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Gb_20572 No alias RNA editing factor (CRR21) 0.03 Archaeplastida
Gb_20910 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_21055 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_21351 No alias RNA editing factor (CRR21) 0.03 Archaeplastida
Gb_21430 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_21443 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.03 Archaeplastida
Gb_21824 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_21965 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_22613 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_23124 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_24126 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_24816 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_25581 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_26571 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_26695 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_27176 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_27879 No alias RNA editing factor (ECB2/VAC1) 0.03 Archaeplastida
Gb_27880 No alias RNA editing factor (ECB2/VAC1) 0.03 Archaeplastida
Gb_28037 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_28582 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_28902 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.03 Archaeplastida
Gb_29995 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
Gb_30004 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.06 Archaeplastida
Gb_31474 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_31699 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.03 Archaeplastida
Gb_31702 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_32017 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_32921 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_33959 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_34299 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_36538 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_36839 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_37509 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
Gb_37820 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_38158 No alias OTP70 plastidial RNA splicing factor 0.05 Archaeplastida
Gb_38301 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_39406 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_40766 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_41233 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_41325 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
LOC_Os06g12510.1 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.06 Archaeplastida
LOC_Os07g39910.1 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 Archaeplastida
LOC_Os11g45410.1 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
LOC_Os12g01850.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.08 Archaeplastida
MA_11454g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
MA_114565g0020 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.06 Archaeplastida
MA_185098g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.06 Archaeplastida
MA_43497g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.08 Archaeplastida
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
MA_66417g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Smo70490 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 Archaeplastida
Smo82024 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Solyc01g097670.4.1 No alias RNA editing factor (ECD1) 0.03 Archaeplastida
Solyc02g005280.1.1 No alias Pentatricopeptide repeat-containing protein At1g50270... 0.04 Archaeplastida
Solyc02g084830.4.1 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.07 Archaeplastida
Solyc03g007840.1.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Solyc03g082830.2.1 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Solyc03g111210.4.1 No alias RNA editing factor (OTP80) 0.03 Archaeplastida
Solyc03g116000.1.1 No alias Pentatricopeptide repeat-containing protein At3g47530... 0.03 Archaeplastida
Solyc03g119950.1.1 No alias RNA editing factor (ECB2/VAC1) 0.03 Archaeplastida
Solyc06g009500.1.1 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Solyc06g053850.4.1 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Solyc07g005740.1.1 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.04 Archaeplastida
Solyc07g062820.1.1 No alias RNA editing factor (SEL1/PDM1) 0.03 Archaeplastida
Solyc07g065730.1.1 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 Archaeplastida
Solyc11g008940.1.1 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
Solyc11g008970.1.1 No alias Pentatricopeptide repeat-containing protein At4g39952,... 0.03 Archaeplastida
Solyc11g062250.2.1 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.03 Archaeplastida
Zm00001e000335_P001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Zm00001e001918_P001 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.04 Archaeplastida
Zm00001e002234_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e003284_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e003562_P001 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.05 Archaeplastida
Zm00001e006544_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e007597_P001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 Archaeplastida
Zm00001e009339_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e009484_P001 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.02 Archaeplastida
Zm00001e011519_P001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 Archaeplastida
Zm00001e011748_P001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 Archaeplastida
Zm00001e012607_P002 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e013116_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e013211_P001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.02 Archaeplastida
Zm00001e014800_P001 No alias Pentatricopeptide repeat-containing protein At2g29760,... 0.03 Archaeplastida
Zm00001e018597_P001 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.02 Archaeplastida
Zm00001e030831_P001 No alias Pentatricopeptide repeat-containing protein At3g20730... 0.03 Archaeplastida
Zm00001e030887_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Zm00001e033310_P001 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.03 Archaeplastida
Zm00001e035419_P001 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 Archaeplastida
Zm00001e036301_P001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 Archaeplastida
Zm00001e036302_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038629_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 393
IPR002885 Pentatricopeptide_repeat 114 162
IPR002885 Pentatricopeptide_repeat 246 292
IPR032867 DYW_dom 543 599
IPR002885 Pentatricopeptide_repeat 510 539
IPR002885 Pentatricopeptide_repeat 189 215
IPR002885 Pentatricopeptide_repeat 422 445
No external refs found!