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  5. MA_285723g0010

MA_285723g0010


Description : Polygalacturonase OS=Persea americana (sp|q02096|pglr_perae : 259.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 227.6)


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000273 (LandPlants) Phylogenetic Tree(s): OG_05_0000273_tree ,
OG_06_0000208 (SeedPlants) Phylogenetic Tree(s): OG_06_0000208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_285723g0010
Cluster HCCA: Cluster_369

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00121270 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.09 Archaeplastida
AMTR_s00104p00026540 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.03 Archaeplastida
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.02 Archaeplastida
GSVIVT01038241001 No alias Polygalacturonase OS=Prunus persica 0.02 Archaeplastida
Gb_05788 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida
Gb_27331 No alias Polygalacturonase OS=Actinidia deliciosa... 0.04 Archaeplastida
LOC_Os01g43490.1 No alias Polygalacturonase OS=Prunus persica... 0.02 Archaeplastida
LOC_Os01g44970.1 No alias polygalacturonase (PGX1) 0.03 Archaeplastida
Smo78038 No alias Cell wall.pectin.modification and... 0.02 Archaeplastida
Solyc01g087280.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g008230.3.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g005170.4.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc12g009420.3.1 No alias Polygalacturonase QRT2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006092_P001 No alias polygalacturonase (QRT2) 0.06 Archaeplastida
Zm00001e006097_P001 No alias polygalacturonase (QRT2) 0.04 Archaeplastida
Zm00001e011814_P002 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 Archaeplastida
Zm00001e013553_P001 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e032294_P001 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 7 325
No external refs found!