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  5. AT5G44970

AT5G44970


Description : Protein with RNI-like/FBD-like domains


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44970
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT1G32020 No alias F-box family protein 0.07 Archaeplastida
AT1G60400 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT1G60410 No alias F-box family protein 0.03 Archaeplastida
AT1G66290 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT1G66320 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT1G66640 No alias RNI-like superfamily protein 0.14 Archaeplastida
AT1G78750 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida
AT1G78760 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT2G27505 No alias FBD-like domain family protein 0.03 Archaeplastida
AT3G23955 No alias F-box family protein 0.06 Archaeplastida
AT5G18770 No alias F-box/FBD-like domains containing protein 0.03 Archaeplastida
AT5G22590 No alias Leucine Rich Repeat protein family 0.05 Archaeplastida
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Archaeplastida
AT5G22720 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 Archaeplastida
AT5G27750 No alias F-box/FBD-like domains containing protein 0.03 Archaeplastida
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G53637 No alias No description available 0.03 Archaeplastida
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004708 MAP kinase kinase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 308 351
IPR013101 Leu-rich_rpt_2 104 130
No external refs found!