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MA_28607g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 778.0)


Gene families : OG0007516 (Archaeplastida) Phylogenetic Tree(s): OG0007516_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_28607g0010
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_05647 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_15476 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
Gb_35268 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.11 Archaeplastida
Gb_35786 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.09 Archaeplastida
LOC_Os09g15800.1 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_74986g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Zm00001e033826_P001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 362 408
IPR002885 Pentatricopeptide_repeat 136 168
IPR002885 Pentatricopeptide_repeat 260 308
IPR002885 Pentatricopeptide_repeat 46 76
IPR002885 Pentatricopeptide_repeat 170 200
IPR002885 Pentatricopeptide_repeat 336 357
IPR002885 Pentatricopeptide_repeat 201 230
IPR002885 Pentatricopeptide_repeat 77 107
IPR002885 Pentatricopeptide_repeat 17 44
IPR032867 DYW_dom 535 659
No external refs found!