MA_287424g0010

Description : no hits & (original description: none)

Gene families : OG0003932 (Archaeplastida) Phylogenetic Tree(s): OG0003932_tree ,
OG_05_0002864 (LandPlants) Phylogenetic Tree(s): OG_05_0002864_tree ,
OG_06_0002483 (SeedPlants) Phylogenetic Tree(s): OG_06_0002483_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_287424g0010
Cluster	HCCA: Cluster_411

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os03g03070.1	No alias	MADS-box transcription factor 50 OS=Oryza sativa subsp....	0.02	Archaeplastida
LOC_Os04g38780.1	No alias	MADS-box transcription factor 27 OS=Oryza sativa subsp....	0.03	Archaeplastida
MA_1090469g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_2986g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_412147g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_607627g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc01g092950.3.1	No alias	MADS-box protein SOC1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc01g093965.2.1	No alias	MADS-box protein SOC1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc06g150109.1.1	No alias	MADS-box protein AGL42 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	2	61

External Links

No external refs found!

MA_287424g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation