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Description : DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana (sp|f4i9q5|dexh7_arath : 353.0)
Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree ,
OG_05_0005088 (LandPlants) Phylogenetic Tree(s): OG_05_0005088_tree ,
OG_06_0005969 (SeedPlants) Phylogenetic Tree(s): OG_06_0005969_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_291146g0010 | |
| Cluster | HCCA: Cluster_407 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G58060 | No alias | RNA helicase family protein | 0.02 | Archaeplastida | |
| AT2G01130 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00000786.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Cre06.g266416 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.02 | Archaeplastida | |
| Gb_05411 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.06 | Archaeplastida | |
| Gb_13707 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| LOC_Os01g02884.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| LOC_Os01g56190.1 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Mp5g09990.1 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | Archaeplastida | |
| Pp3c11_11510V3.1 | No alias | helicase in vascular tissue and tapetum | 0.03 | Archaeplastida | |
| Pp3c14_12310V3.1 | No alias | RNA helicase family protein | 0.02 | Archaeplastida | |
| Pp3c26_14400V3.1 | No alias | RNA helicase family protein | 0.02 | Archaeplastida | |
| Smo173775 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Smo177444 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | Archaeplastida | |
| Smo50132 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Solyc01g103690.4.1 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.04 | Archaeplastida | |
| Solyc07g044930.3.1 | No alias | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0071203 | WASH complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001650 | Helicase_C | 67 | 198 |
| No external refs found! |