MA_291146g0010


Description : DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana (sp|f4i9q5|dexh7_arath : 353.0)


Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree ,
OG_05_0005088 (LandPlants) Phylogenetic Tree(s): OG_05_0005088_tree ,
OG_06_0005969 (SeedPlants) Phylogenetic Tree(s): OG_06_0005969_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_291146g0010
Cluster HCCA: Cluster_407

Target Alias Description ECC score Gene Family Method Actions
AT1G58060 No alias RNA helicase family protein 0.02 Archaeplastida
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000786.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre06.g266416 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 Archaeplastida
Gb_05411 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.06 Archaeplastida
Gb_13707 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g02884.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g56190.1 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.04 Archaeplastida
Mp5g09990.1 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 Archaeplastida
Pp3c11_11510V3.1 No alias helicase in vascular tissue and tapetum 0.03 Archaeplastida
Pp3c14_12310V3.1 No alias RNA helicase family protein 0.02 Archaeplastida
Pp3c26_14400V3.1 No alias RNA helicase family protein 0.02 Archaeplastida
Smo173775 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo177444 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 Archaeplastida
Smo50132 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g103690.4.1 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.04 Archaeplastida
Solyc07g044930.3.1 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 67 198
No external refs found!