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  5. MA_29517g0010

MA_29517g0010


Description : U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica (sp|q5vrh9|pub12_orysj : 270.0)


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0004745 (LandPlants) Phylogenetic Tree(s): OG_05_0004745_tree ,
OG_06_0003008 (SeedPlants) Phylogenetic Tree(s): OG_06_0003008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_29517g0010
Cluster HCCA: Cluster_385

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00030110 evm_27.TU.AmTr_v1... U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00025p00052670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G29340 ATPUB17, PUB17 plant U-box 17 0.02 Archaeplastida
AT5G42340 PUB15 Plant U-Box 15 0.03 Archaeplastida
GSVIVT01016225001 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_10871 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Gb_12875 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.01 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.01 Archaeplastida
LOC_Os01g60860.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g16824.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os05g39930.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g51130.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os08g37570.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.02 Archaeplastida
MA_69133g0010 No alias E3 ubiquitin ligase (PUB) 0.01 Archaeplastida
MA_9917294g0010 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Smo113592 No alias U-box domain-containing protein 2 OS=Arabidopsis thaliana 0.01 Archaeplastida
Smo415326 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.03 Archaeplastida
Smo75609 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.01 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.01 Archaeplastida
Solyc04g050780.2.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Solyc11g008390.2.1 No alias E3 ubiquitin ligase (PUB) 0.01 Archaeplastida
Zm00001e002954_P001 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e003398_P001 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e019429_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e031915_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 96 166
IPR000225 Armadillo 303 341
No external refs found!