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  5. MA_29804g0010

MA_29804g0010


Description : component RPL15 of LSU proteome component


Gene families : OG0002310 (Archaeplastida) Phylogenetic Tree(s): OG0002310_tree ,
OG_05_0093110 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074038 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_29804g0010
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00023340 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AT4G16720 No alias Ribosomal protein L23/L15e family protein 0.09 Archaeplastida
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.22 Archaeplastida
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Cre02.g091100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01014039001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Gb_36986 No alias component RPL15 of LSU proteome component 0.17 Archaeplastida
LOC_Os03g40180.1 No alias component RPL15 of LSU proteome component 0.24 Archaeplastida
LOC_Os05g19370.1 No alias component RPL15 of LSU proteome component 0.27 Archaeplastida
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.27 Archaeplastida
Pp3c14_22920V3.1 No alias Ribosomal protein L23/L15e family protein 0.26 Archaeplastida
Pp3c17_22180V3.1 No alias Ribosomal protein L23/L15e family protein 0.2 Archaeplastida
Pp3c1_37420V3.1 No alias Ribosomal protein L23/L15e family protein 0.23 Archaeplastida
Pp3c20_2640V3.1 No alias Ribosomal protein L23/L15e family protein 0.21 Archaeplastida
Pp3c2_5780V3.1 No alias Ribosomal protein L23/L15e family protein 0.23 Archaeplastida
Pp3c8_22360V3.1 No alias Ribosomal protein L23/L15e family protein 0.24 Archaeplastida
Smo270259 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
Solyc04g008460.4.1 No alias component RPL15 of LSU proteome component 0.17 Archaeplastida
Solyc06g060400.3.1 No alias component RPL15 of LSU proteome component 0.27 Archaeplastida
Solyc06g064630.3.1 No alias component RPL15 of LSU proteome component 0.23 Archaeplastida
Zm00001e010380_P001 No alias component RPL15 of LSU proteome component 0.25 Archaeplastida
Zm00001e032897_P001 No alias component RPL15 of LSU proteome component 0.2 Archaeplastida
Zm00001e034995_P001 No alias component RPL15 of LSU proteome component 0.23 Archaeplastida
Zm00001e034996_P001 No alias component RPL15 of LSU proteome component 0.21 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 21 154
No external refs found!