1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_299481g0010

MA_299481g0010


Description : Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana (sp|q9fix3|pp407_arath : 712.0)


Gene families : OG0008008 (Archaeplastida) Phylogenetic Tree(s): OG0008008_tree ,
OG_05_0004984 (LandPlants) Phylogenetic Tree(s): OG_05_0004984_tree ,
OG_06_0001824 (SeedPlants) Phylogenetic Tree(s): OG_06_0001824_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_299481g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00073890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39710... 0.04 Archaeplastida
AT5G39710 EMB2745 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
LOC_Os06g05920.1 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.4 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 444 492
IPR002885 Pentatricopeptide_repeat 584 631
IPR002885 Pentatricopeptide_repeat 303 352
IPR002885 Pentatricopeptide_repeat 513 562
IPR002885 Pentatricopeptide_repeat 373 422
IPR002885 Pentatricopeptide_repeat 668 717
IPR002885 Pentatricopeptide_repeat 198 246
IPR002885 Pentatricopeptide_repeat 640 664
IPR002885 Pentatricopeptide_repeat 742 771
IPR002885 Pentatricopeptide_repeat 264 296
No external refs found!