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  5. AT5G45530

AT5G45530


Description : Protein of unknown function (DUF594)


Gene families : OG0000524 (Archaeplastida) Phylogenetic Tree(s): OG0000524_tree ,
OG_05_0000286 (LandPlants) Phylogenetic Tree(s): OG_05_0000286_tree ,
OG_06_0000782 (SeedPlants) Phylogenetic Tree(s): OG_06_0000782_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G45530
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014456001 No alias No description available 0.05 Archaeplastida
GSVIVT01015712001 No alias No description available 0.05 Archaeplastida
LOC_Os01g58500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g42080.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Neighborhood
BP GO:0010417 glucuronoxylan biosynthetic process IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
BP GO:0044257 cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025315 DUF4220 51 425
IPR007658 DUF594 726 778
No external refs found!