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AT5G45760


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0006648 (Archaeplastida) Phylogenetic Tree(s): OG0006648_tree ,
OG_05_0007063 (LandPlants) Phylogenetic Tree(s): OG_05_0007063_tree ,
OG_06_0008959 (SeedPlants) Phylogenetic Tree(s): OG_06_0008959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G45760
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g10790.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEP Neighborhood
BP GO:0000018 regulation of DNA recombination IEP Neighborhood
MF GO:0000182 rDNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003923 GPI-anchor transamidase activity IEP Neighborhood
MF GO:0004815 aspartate-tRNA ligase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0007005 mitochondrion organization IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0009378 four-way junction helicase activity IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
MF GO:0016929 SUMO-specific protease activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
MF GO:0036310 annealing helicase activity IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0045910 negative regulation of DNA recombination IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046520 sphingoid biosynthetic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
MF GO:0080084 5S rDNA binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097617 annealing activity IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 142 177
IPR001680 WD40_repeat 269 305
No external refs found!