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Description : endoribonuclease (CSP41)
Gene families : OG0006344 (Archaeplastida) Phylogenetic Tree(s): OG0006344_tree ,
OG_05_0007796 (LandPlants) Phylogenetic Tree(s): OG_05_0007796_tree ,
OG_06_0009326 (SeedPlants) Phylogenetic Tree(s): OG_06_0009326_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_307070g0010 | |
| Cluster | HCCA: Cluster_227 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00246210 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.ribonuclease... | 0.11 | Archaeplastida | |
| AT3G63140 | CSP41A | chloroplast stem-loop binding protein of 41 kDa | 0.13 | Archaeplastida | |
| Cpa|evm.model.tig00021720.14 | No alias | RNA processing.organelle machineries.ribonuclease... | 0.04 | Archaeplastida | |
| Cre10.g440050 | No alias | RNA processing.organelle machineries.ribonuclease... | 0.07 | Archaeplastida | |
| GSVIVT01011082001 | No alias | RNA processing.organelle machineries.ribonuclease... | 0.1 | Archaeplastida | |
| Gb_01706 | No alias | endoribonuclease (CSP41) | 0.09 | Archaeplastida | |
| LOC_Os07g11110.1 | No alias | endoribonuclease (CSP41) | 0.06 | Archaeplastida | |
| Mp6g11330.1 | No alias | endoribonuclease (CSP41) | 0.09 | Archaeplastida | |
| Pp3c3_30330V3.1 | No alias | chloroplast stem-loop binding protein of 41 kDa | 0.11 | Archaeplastida | |
| Smo133157 | No alias | RNA processing.organelle machineries.ribonuclease... | 0.06 | Archaeplastida | |
| Smo185868 | No alias | RNA processing.organelle machineries.ribonuclease... | 0.07 | Archaeplastida | |
| Solyc09g065180.3.1 | No alias | endoribonuclease (CSP41) | 0.09 | Archaeplastida | |
| Zm00001e033112_P001 | No alias | endoribonuclease (CSP41) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Neighborhood |
| MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Neighborhood |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Neighborhood |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
| BP | GO:0006096 | glycolytic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Neighborhood |
| BP | GO:0006415 | translational termination | IEP | Neighborhood |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Neighborhood |
| BP | GO:0006757 | ATP generation from ADP | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Neighborhood |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Neighborhood |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Neighborhood |
| MF | GO:0010181 | FMN binding | IEP | Neighborhood |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Neighborhood |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Neighborhood |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Neighborhood |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Neighborhood |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Neighborhood |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Neighborhood |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Neighborhood |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Neighborhood |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Neighborhood |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0019829 | cation-transporting ATPase activity | IEP | Neighborhood |
| BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Neighborhood |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Neighborhood |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Neighborhood |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Neighborhood |
| BP | GO:0046031 | ADP metabolic process | IEP | Neighborhood |
| BP | GO:0046034 | ATP metabolic process | IEP | Neighborhood |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046434 | organophosphate catabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Neighborhood |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Neighborhood |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0051186 | cofactor metabolic process | IEP | Neighborhood |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Neighborhood |
| MF | GO:0051287 | NAD binding | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Neighborhood |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Neighborhood |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |