MA_310797g0010


Description : 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana (sp|q9ly66|rk1_arath : 139.0)


Gene families : OG0001793 (Archaeplastida) Phylogenetic Tree(s): OG0001793_tree ,
OG_05_0006014 (LandPlants) Phylogenetic Tree(s): OG_05_0006014_tree ,
OG_06_0008345 (SeedPlants) Phylogenetic Tree(s): OG_06_0008345_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_310797g0010
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00035950 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 Archaeplastida
Cre02.g088900 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
GSVIVT01032196001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_16169 No alias component psRPL1 of large ribosomal subunit proteome 0.03 Archaeplastida
LOC_Os05g32220.1 No alias component psRPL1 of large ribosomal subunit proteome 0.02 Archaeplastida
Mp1g07500.1 No alias component psRPL1 of large ribosomal subunit proteome 0.05 Archaeplastida
Pp3c23_11170V3.1 No alias Ribosomal protein L1p/L10e family 0.02 Archaeplastida
Pp3c23_7820V3.1 No alias Ribosomal protein L1p/L10e family 0.03 Archaeplastida
Pp3c24_9740V3.1 No alias Ribosomal protein L1p/L10e family 0.02 Archaeplastida
Smo143134 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Solyc01g087730.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e031570_P001 No alias component psRPL1 of large ribosomal subunit proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 21 90
No external refs found!