MA_31396g0010


Description : Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana (sp|q8l6y3|pp396_arath : 362.0)


Gene families : OG0015413 (Archaeplastida) Phylogenetic Tree(s): OG0015413_tree ,
OG_05_0015258 (LandPlants) Phylogenetic Tree(s): OG_05_0015258_tree ,
OG_06_0014939 (SeedPlants) Phylogenetic Tree(s): OG_06_0014939_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_31396g0010
Cluster HCCA: Cluster_93


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 474 505
IPR002885 Pentatricopeptide_repeat 612 644
IPR002885 Pentatricopeptide_repeat 438 462
IPR002885 Pentatricopeptide_repeat 577 609
IPR002885 Pentatricopeptide_repeat 511 560
IPR002885 Pentatricopeptide_repeat 198 245
IPR002885 Pentatricopeptide_repeat 266 315
IPR002885 Pentatricopeptide_repeat 371 420
IPR002885 Pentatricopeptide_repeat 657 684
IPR002885 Pentatricopeptide_repeat 339 369
No external refs found!