MA_31606g0010


Description : cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of nuclear pore complex


Gene families : OG0005699 (Archaeplastida) Phylogenetic Tree(s): OG0005699_tree ,
OG_05_0005057 (LandPlants) Phylogenetic Tree(s): OG_05_0005057_tree ,
OG_06_0004420 (SeedPlants) Phylogenetic Tree(s): OG_06_0004420_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_31606g0010
Cluster HCCA: Cluster_516

Target Alias Description ECC score Gene Family Method Actions
Cre07.g313500 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Gb_08947 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
LOC_Os07g48602.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
Mp3g04100.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
Solyc02g032380.3.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.02 Archaeplastida
Solyc02g032450.3.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.02 Archaeplastida
Solyc02g032480.3.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
Zm00001e035895_P006 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!