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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 550.0)
Gene families : OG0009648 (Archaeplastida) Phylogenetic Tree(s): OG0009648_tree ,
OG_05_0093151 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074084 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_318389g0010 | |
| Cluster | HCCA: Cluster_308 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_00639 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | Archaeplastida | |
| Gb_08968 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | Archaeplastida | |
| Gb_11036 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | Archaeplastida | |
| Gb_14458 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.13 | Archaeplastida | |
| Gb_21046 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
| Gb_31319 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.11 | Archaeplastida | |
| Gb_33134 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | Archaeplastida | |
| MA_10090072g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 705 | 729 |
| IPR002885 | Pentatricopeptide_repeat | 186 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 501 | 529 |
| IPR002885 | Pentatricopeptide_repeat | 377 | 404 |
| IPR002885 | Pentatricopeptide_repeat | 470 | 498 |
| IPR002885 | Pentatricopeptide_repeat | 88 | 113 |
| IPR002885 | Pentatricopeptide_repeat | 214 | 244 |
| IPR002885 | Pentatricopeptide_repeat | 408 | 434 |
| IPR002885 | Pentatricopeptide_repeat | 631 | 679 |
| IPR002885 | Pentatricopeptide_repeat | 274 | 320 |
| IPR002885 | Pentatricopeptide_repeat | 437 | 468 |
| IPR002885 | Pentatricopeptide_repeat | 114 | 161 |
| IPR002885 | Pentatricopeptide_repeat | 530 | 578 |
| No external refs found! |