MA_31885g0010


Description : transcription factor (mTERF)


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_31885g0010
Cluster HCCA: Cluster_470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00114980 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AMTR_s00084p00087230 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00126p00036100 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00126p00036560 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
GSVIVT01028384001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
Gb_00751 No alias transcription factor (mTERF) 0.06 Archaeplastida
Gb_06120 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.04 Archaeplastida
Gb_12368 No alias transcription factor (mTERF) 0.07 Archaeplastida
Gb_12989 No alias transcription factor (mTERF) 0.05 Archaeplastida
Gb_14091 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_24665 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os05g33440.1 No alias transcription factor (mTERF) 0.01 Archaeplastida
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12060.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os06g12100.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os11g09990.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os11g10000.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_122549g0010 No alias transcription factor (mTERF) 0.05 Archaeplastida
MA_33244g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_714651g0010 No alias transcription factor (mTERF) 0.1 Archaeplastida
MA_86824g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_92135g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc02g082010.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida
Zm00001e031638_P001 No alias transcription factor (mTERF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 179 316
No external refs found!